BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006D10SP1|AL425533
(1000 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1604 1289 0.0
>3x_Contig1604
Length = 15703
Score = 1289 bits (647), Expect = 0.0
Identities = 713/731 (97%), Gaps = 8/731 (1%)
Strand = Plus / Plus
Query: 276 ccgaagagcatttgggaactacatcaagaggttgttttgagtgagactggttctacccat 335
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10982 ccgaagagcatt-gggaactacatcaagaggttgttttgagtgagactggttctacccat 11040
Query: 336 gatctgtatctcagagtattcaaggttctaaaaccaaaacaagagcgagaagaagctggc 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11041 gatctgtatctcagagtattcaaggttctaaaaccaaaacaagagcgagaagaagctggc 11100
Query: 396 acgccaccattggaaaagaaattaaagcttgaggttaaggatgtgaatgaggatgatcta 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11101 acgccaccattggaaaagaaattaaagcttgaggttaaggatgtgaatgaggatgatcta 11160
Query: 456 tatgabacccactggctgcttggatctgtggaacatggagaattgttatcttcagacact 515
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11161 tatgatacccactggctgcttggatctgtggaacatggagaattgttatcttcagacact 11220
Query: 516 ccatctattcctaaggaatggagtgacaaaattagngaaatcttgcaaacaaaatcctca 575
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 11221 ccatctattcctaaggaatggagtgacaaaattagtgaaatcttgcaaacaaaatcctca 11280
Query: 576 ncanatcaagatatgtcaaatacctggacacttgaattaaagtcatgtccacacatacag 635
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11281 tcatatcaagatatgtcaaatacctggacacttgaattaaagtcatgtccacacatacag 11340
Query: 636 actttcgacttatcgaacttggagaagcgagaaggtggcatttctcaaagctgtaacgac 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11341 actttcgacttatcgaacttggagaagcgagaaggtggcatttctcaaagctgtaacgac 11400
Query: 696 tgtggtcttacttctaacctttggttatgtctccattgtggaaacgtcgcctgtkgaaga 755
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 11401 tgtggtcttacttctaacctttggttatgtctccattgtggaaacgtcgcctgtggaaga 11460
Query: 756 kagcaggttgggatagaggggtactctcatgctttgaaacattatgawagcacagatggc 815
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 11461 gagcaggttgggatagaggggtactctcatgctttgaaacattatgaaagcacagatggc 11520
Query: 816 cacgctttagcgataaaattkggctctttgacagctgatgcagctgatatatactgttat 875
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 11521 cacgctttagcgataaaattgggctctttgacagctgatgcagctgatatatactgttat 11580
Query: 876 tcttgtgatgaagatgtgaaattcacccataatctgcagttgcaggatatcttgaagttt 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11581 tcttgtgatgaagatgtgaaattcacccataatctgcagttgcaggatatcttgaagttt 11640
Query: 936 tggg-agtcg-agta-cagccaagtccaa--gaaagacattggtgg-attgcaagtgg-a 988
|||| ||||| |||| ||||||||||||| |||||||||||||| ||||||||||| |
Sbjct: 11641 tgggaagtcgaagtaccagccaagtccaaagaaaagacattggtggaattgcaagtggaa 11700
Query: 989 maaagtctgaa 999
||||||||||
Sbjct: 11701 caaagtctgaa 11711
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6156
Number of Sequences: 1807
Number of extensions: 6156
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 1000
length of database: 10,358,551
effective HSP length: 16
effective length of query: 984
effective length of database: 10,329,639
effective search space: 10164364776
effective search space used: 10164364776
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)